Package: gwaRs 0.3.0
gwaRs: Manhattan, Q-Q, and PCA Plots using 'ggplot2'
Generate Manhattan, Q-Q, and PCA plots from GWAS and PCA results using 'ggplot2'.
Authors:
gwaRs_0.3.0.tar.gz
gwaRs_0.3.0.zip(r-4.5)gwaRs_0.3.0.zip(r-4.4)gwaRs_0.3.0.zip(r-4.3)
gwaRs_0.3.0.tgz(r-4.4-any)gwaRs_0.3.0.tgz(r-4.3-any)
gwaRs_0.3.0.tar.gz(r-4.5-noble)gwaRs_0.3.0.tar.gz(r-4.4-noble)
gwaRs_0.3.0.tgz(r-4.4-emscripten)gwaRs_0.3.0.tgz(r-4.3-emscripten)
gwaRs.pdf |gwaRs.html✨
gwaRs/json (API)
NEWS
# Install 'gwaRs' in R: |
install.packages('gwaRs', repos = c('https://lindonkambule.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/lindonkambule/gwars/issues
- gwasData - GWAS results
- highlightSNPS - Highlight SNPs
- pcaData - PCA results
Last updated 4 years agofrom:58f56c7115. Checks:OK: 1 WARNING: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 09 2024 |
R-4.5-win | WARNING | Oct 09 2024 |
R-4.5-linux | WARNING | Oct 09 2024 |
R-4.4-win | WARNING | Oct 09 2024 |
R-4.4-mac | WARNING | Oct 09 2024 |
R-4.3-win | WARNING | Oct 09 2024 |
R-4.3-mac | WARNING | Oct 09 2024 |
Exports:karyotype_plotman_plotmirrored_man_plotpca_plotqq_plot
Dependencies:clicolorspacecpp11data.tabledplyrfansifarvergenericsggplot2ggrepelgluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigpurrrR6RColorBrewerRcpprlangscalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Create Manhattan, Q-Q, and PCA plots for GWAS data. | gwaRs-package gwaRs |
GWAS results | gwasData |
Highlight SNPs | highlightSNPS |
Karyotype Plot | karyotype_plot |
Manhattan Plot | man_plot |
Mirrored Manhattan Plot | mirrored_man_plot |
PCA Plot | pca_plot |
PCA results | pcaData |
QQ Plot | qq_plot |