Introduction to the gwaRs package | 1. Example data | 1.A gwasData | 1.B pcaData | 2. Manhattan plots | 2A. Basic Manhattan plot | 2B. Change graphical parameters | 2C. Annotate SNPs by p-value | 2D. Annotate SNPs by rsids | 2E. Highlight SNPs by rsid | 2F. Looking at a single chromosome | 3. Mirrored Manhattan Plots | 4. Q-Q plots | 5. PCA plots | 6. Karyotype plots